IMO, popunders are worse than popups. Especiall for those with their browsers maximized...especially for those on a mac where there is no task bar at the bottom.
Whether pertinent information or not, popunders are never good for a site's reputation because (1) it's annoying, and (2) since it's popping under, it comes off as trying to either hide something from your users, or trying to be sneaky...which kind of goes hand in hand with trying to hide something.
Also, with more and more people (myself included) using popup blockers, I don't even know that your popup will reach half your visitors.
Just my 2 cents. 
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