The thing is the content from the external file that it loads does not get displayed within the source code, so search engines will not be able to see this.
Is there a work around for this, or can someone point me in the right direction to what I am trying to achieve
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Indifference will be the downfall of mankind, but who cares? Code Samples | People Counting System
Javascript is not able to be indexed by S.E. but there may be a script that will convert your sites Javascript code into PHP/HTML if you do a Google search for it.